General Resources
Sequence Databases
Web Tools
International Society for Computational Biology (ISCB)
General Resources:
Tools & Software
BioPERL
GDE (Genetic Data Envirioment)
National Center for Biotechnology Information (NCBI)
Genbank & SwissProt searches
BLAST searches
ENTREZ searches
Advanced BLAST Version 2 searches
Phylogeny Packages
RNA Packages
University of Pretoria Molecular Modelling Page
Biotoolkit
Scientific Applications under Linux
NCSA Biology Workbench
BCM Search Launcher
Restriction Enzyme Analysis
The Primer Design Home Page
The Complete PCR Home Page
Sincris Software List
Hopkins BioInformatics
EMBL WWW server
Structural Classification of Proteins (SCOP) : Cambridge
Biologist's Control Panel (Cambridge)
Brookhaven Protein Data Base
Brookhaven Protein Data Base - Search Form
Crystallization database
Swiss Protein Database
ProMod Protein Structure Prediction
Sequence Analysis Tools
Guide to Molecular Modeling Software (NIH)
National Institutes of Health
Harvard Biopages
SEQNET
EMBL Amino acid analysis
Biology Software
EBI Database Gateway
BIOSCI WWW Home Page
Journals
Journal of Computer Aided Molecular Design
Biochemical Journal
Electronic Journal of Protein Science
Science
Nucleic Acids Research
Nature
Journal of Biological Chemistry
PNAS
Other Journals
Companies
Novagen
Invitrogen
Boehringer
Pharmacia
Promega
Epicentre
Sigma
Gibco
Sequence Databases:
Rooslab
Parasite EST - Li
Parasite EST - Brian
Motif search (Pf & Tg)
PlasmoDB
Data Mining Results
Apicomplexan
Sanger P.f .Genome
Sanger FTP site
TIGR P.f. Genome
NCBI Plasmodium
Stanford P.f. Genome
Eimeria
Cryptosporidium Genome
Cryptosporidium EST,GSS
Other Parasite
TIGR T. brucei chrII
T. cruzi
WHO Schistosma Genome
EBI Parasite DB's
Leishmania
Brugia
Onchocerca
Other Genome
Ensembl - Human
Allgenes - Human
DOE Human Genome
DOE Microbial Genomes
TIGR Microbial Database
MAGPIE Genome List
Giardia Lamblia
Saccharomyces DB
Arabidopsis
Web Tools: (Generic)
Genbank (NCBI)
Blast
Medline
Entrez
Grateful Med
Bankit (submission)
Taxonomy
FTP & toolkit
EBI (EMBL)
Expasy Tools
Baylor (Clustal, Beauty)
Codon Usage Database
Web Tools (Prediction)
SignalP server
ChloroP server
Gene Prediction
Secondary Struc. Prediction
Primer3 - Primer design
Splice sites (H.s., A.t.)
Motif Searching
InterPro (motif)
Pfam (motif)
Peptide Sequence
MotifScanner
Similarity Searching
FASTA3
Smith-Waterman
Blast 2 sequences
Web Tools (RNA)
RNA folding
tRNA prediction
Gutell's rRNA DB
SSUrRNA database
Web Tools (Alignment)
Align 2 or more sequences
Box Shade
LALIGN ( 2 sequences)
Web Tools (Phylogeny)
Web Phylip
Other useful Sites
PHYLIP
PAUP
IUBIO Archives
Java (PAL) phylogenetics
PIR Database (Searchable)
ACEDB (Documentation)
Glimmer
SEALS
Intro to Bioinformatics
Genamics resources
GeneCards
Gene Ontology
SPLASH -IBM
DNA Sequence Analysis
Regulatory Site Finding
